PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100262240031
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 316aa    MW: 35372.1 Da    PI: 8.1402
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100262240031genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.3e-14112158455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    hn  E+rRR+riN++   L+ l+P++      K +Ka++L  A++Y+k+Lq
  Ote100262240031|100262240031 112 VHNLSEKRRRSRINEKKKALQNLIPNS-----NKTDKASMLDDAIDYLKQLQ 158
                                   6*************************7.....5******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.107.2E-18105166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-18105166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.104108157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.28E-13111162No hitNo description
PfamPF000107.9E-12112158IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.3E-16114163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MRFLAFSILH QILLPSSSSS SHSVLNRQPL LPTSHHVAAE QQVPEISTFN SCSTCSFAAA  60
TNVSPSSVGN LDNETDDCEY ESVEAVEALM AESAAKSAPR RCSSKRSRAA EVHNLSEKRR  120
RSRINEKKKA LQNLIPNSNK TDKASMLDDA IDYLKQLQLQ VQANVDNEKW IKPLSYLPAE  180
YAATAQSTFS NKDSLLRLPE NFVKQEHTSN FSSMIHKTSA DAESYLLQHQ LGAFQLPRSF  240
KKETVLPLVE QDCPQRAKAR CYLIPVEEQT SRLKDDILES RADILLGSLI LKILAQNSLI  300
TYDINIVARK NFHAQK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099122.12e-53PREDICTED: transcription factor SPATULA-like
TrEMBLA0A0H3YC584e-83A0A0H3YC58_SALMI; Basic helix-loop-helix transcription factor
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA98502227